Input File Body: List of ROIs and Corresponding Tasks
The input file Body begins with the line containing “Body” and follows with a line of column labels. The first two tasks should be "start" and "finish". User should not edit them. Each line below defines one task. For most task there are 9 columns identifying the ROI and task.
Default Task Input Columns:
A. Task Instructions
Task Name (String): Name for each task, user should choose one task from task list.
Task ID (String): Identification number of the task independent from the order that they are presented
Task Order (Int): Task appear order
-
If the value of “taskorder” defined in the Header is set to “1”: User should set task order at here starting from 1 without repeat.
-
If the value of “taskorder” defined in the Header is set to “0”: User should set task oredr for all tasks as -1.
Slot (Int) : Specifies the stage slot for the task. This, consequently, specifies the glass slide for the task based on the header information.
B. Input Variables
ROI_X (Int) : WSI ROI center pixel position in X direction.
ROI_Y (Int): WSI ROI center pixel position in Y direction.
ROI_W (Int): Pixel width of the ROI.
ROI_H (Int): Pixel height of the ROI.
Q_Text (String): This field contains the question (free text) displayed to the reader.
*Do not use commas here or the input file format will be corrupt.*
Default Task Input format: Each line defines one task, use comma to separate input columns.
Task Name, Task ID, Task Order,Slot, ROI_X, ROI_Y, ROI_W, ROI_H,Q_Text
Other Task Input Columns: Some special tasks has different input columes
mitotic_train: padding 8 more columns for expert checkbox result (1: checked; 0: not checked), 1 more column for rating result at end of Default Task Input Columns.
checkMof4, radio1of4: padding 4 more columns to define 4 opitions at end of Default Task Input Columns.
get_WSI_position: Do not have Slot, ROI_X, and ROI_Y columns.