eeDAP: Evaluation Environment for Digital and Analog Pathology, BIO Formats: Possible Errors
BIO Formats: Possible Errors
The BIO formats might have some problems when extracting the WSI. In this section we show two normally errors and the solving methods
1. Image File is too Large
This error is because the input WSI image file is too large. Now we are using 5.1.2 version Bio formats. It works for file smaller than 4 GB. If you want to use a larger image, you might face this problem.
2.Out of Memory/Storage
When we process a large image, there might be an error message about being out of memory. For large image a minimum of 512 MB is suggested.
Users can download the java.opts and paste it in the matlab root directory, or follow this website : Mathwork Answers